Oct 28, 2019 Transcriptome age index and transcriptome divergence index profiles in developmental paths differentiation. To understand the transcriptome of  Transcriptome Divergence and the Loss of Plasticity in Bacillus subtilis after [ http://research.jax.org/faculty/churchill/software/Rmaanova/index.html]) and (ii)  The phylotypic stage is the most conserved stage of embryogenesis between species within a that displays maximal conservation of gene expression or minimal gene sequence divergence between species within a phylum. "A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns".

Apr 28, 2016 Transcriptional conservation and divergence of Plasmodium syntenic transcriptome age index mirrors ontogenetic divergence patterns. Jun 16, 2016 TIGR Gene Indices clustering tools. (TGICL): a software system for fast clustering of large EST datasets. Bioinformatics 19,. 651-652. Poelchau,  A low mean transcriptome age value denotes an evolutionary older transcriptome being active during the corresponding periods, whereas a high mean transcriptome age value denotes an evolutionary younger transcriptome being active during the corresponding periods. This function computes the sequence distance based transcriptome divergence index (TDI) introduced by Quint et al., 2012.

A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns. Domazet-Lošo T(1), Tautz D. Author information: (1)Max-Planck-Institut für Evolutionsbiologie, August-Thienemannstrasse 2, 24306 Plön, Germany. tdomazet@irb.hr

This function computes the sequence distance based transcriptome divergence index (TDI) introduced by Quint et al., 2012. This function computes the sequence distance based transcriptome divergence index (TDI) introduced by Quint et al., 2012. a, Cumulative transcriptome age index (TAI) for the different developmental stages. The pink shaded area represents the presumptive phylotypic phase in vertebrates. The overall pattern is significant by repeated measures ANOVA (P = 2.4 × 10 −15 , after Greenhouse–Geisser correction P = 0.024). f-divergence cutoff index to simultaneously identify differential expression in the integrated transcriptome and proteome Shaojun Tang , 1 Martin Hemberg , 2 Ertugrul Cansizoglu , 3 Stephane Belin , 3 Kenneth Kosik , 4 Gabriel Kreiman , 2 Hanno Steen , 1, * and Judith Steen 3, *

PlotPattern: Plot the Transcriptome Age Index or Transcriptome Divergence In myTAI: Evolutionary Transcriptomics Description Usage Arguments Details Value Author(s) References See Also Examples

This function computes the sequence distance based transcriptome divergence index (TDI) introduced by Quint et al., 2012. a, Cumulative transcriptome age index (TAI) for the different developmental stages. The pink shaded area represents the presumptive phylotypic phase in vertebrates. The overall pattern is significant by repeated measures ANOVA (P = 2.4 × 10 −15 , after Greenhouse–Geisser correction P = 0.024). f-divergence cutoff index to simultaneously identify differential expression in the integrated transcriptome and proteome Shaojun Tang , 1 Martin Hemberg , 2 Ertugrul Cansizoglu , 3 Stephane Belin , 3 Kenneth Kosik , 4 Gabriel Kreiman , 2 Hanno Steen , 1, * and Judith Steen 3, * PlotPattern: Plot the Transcriptome Age Index or Transcriptome Divergence In myTAI: Evolutionary Transcriptomics Description Usage Arguments Details Value Author(s) References See Also Examples

Apr 28, 2016 Transcriptional conservation and divergence of Plasmodium syntenic transcriptome age index mirrors ontogenetic divergence patterns.

Mar 14, 2016 f-divergence cutoff index to simultaneously identify differential expression in the integrated transcriptome and proteome. Shaojun Tang, Martin  Title, A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns. Organism, Danio rerio. Experiment type, Expression profiling  Nov 14, 2018 At the same floral development stage, transcriptome analysis showed that 1064 Transcriptomes Divergence of Ricotia lunaria Between the Two Brassicaceae: chromosome number index and database on CD-Rom. Oct 28, 2019 Transcriptome age index and transcriptome divergence index profiles in developmental paths differentiation. To understand the transcriptome of  Transcriptome Divergence and the Loss of Plasticity in Bacillus subtilis after [ http://research.jax.org/faculty/churchill/software/Rmaanova/index.html]) and (ii)  The phylotypic stage is the most conserved stage of embryogenesis between species within a that displays maximal conservation of gene expression or minimal gene sequence divergence between species within a phylum. "A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns".

Mar 14, 2016 f-divergence cutoff index to simultaneously identify differential expression in the integrated transcriptome and proteome. Shaojun Tang, Martin 

Jun 1, 2019 Comparative transcriptome analysis is the comparison of expression of our method to reveal functional conservation and divergence of genes in two plant species. A genome index will be created for each species. Step 2. Sep 29, 2015 In-Depth Duodenal Transcriptome Survey in Chickens with Divergent The residual feed intake (RFI) index was estimated with the model as 

Dec 8, 2010 A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns. Tomislav Domazet-Lošo &; Diethard Tautz.